9 Best Payroll Software for Small Business Users in 2024

Human Resources | Buyer’s Guide
* Aside from being affordably priced, the best payroll software for small business users calculates employee wages and deductions accurately and pays and files payroll taxes automatically. * Most offer unlimited pay runs, paid time off (PTO) tracking, two-day direct deposits, employee self-service portals, and access to employee benefits.
* To find the ideal payroll systems for small businesses, we evaluated more than a dozen solutions and narrowed the list down to our top nine recommendations:
  • Gusto: Best overall small business payroll software and for those needing solid HR support
  • QuickBooks Payroll: Best for QuickBooks accounting users and fast direct deposits
  • Rippling: Best all-in-one human resources (HR), payroll, and information technology (IT) solution
  • Square Payroll: Best for small restaurants, retail shops, and Square POS users
  • OnPay: Best for delegating payroll duties and those with niche payroll needs
  • Paychex Flex: Best for startups and small companies needing dedicated payroll support
  • ADP Run: Best for rapidly scaling small businesses
  • Homebase Payroll: Best for businesses with hourly workers
  • Patriot Payroll: Best for mom-and-pop businesses that want a low-cost DIY option
Featured Partner 
QuickBooks Payroll offers versatile, user-friendly payroll solutions tailored to diverse employee needs.
QuickBooks logoAutomatic and unlimited pay runsLow-cost contractor paymentsFast direct depositsRobust tax penalty protectionVisit QuickBooks Payroll

Why You Can Trust Fit Small Business

Best Payroll Software for Small Businesses Compared

All the providers in this guide offer full-service payroll, tax filing services, year-end reporting, and direct deposit payments, and employee self-service portals. They also provide time tracking tools (except for OnPay), as well as new hire onboarding solutions (except for Patriot Payroll). Here are some of the key features, including the providers’ basic pricing information.

Free Trial PromotionStarter Monthly PricingContractor Only Payroll PlanTime TrackingHealth Benefits Covers All States
One month free*$6 per employee plus $40 base fee$6 per worker plus $35 monthlyIncluded in higher tiersLimited to 37 states
Visit Gusto or Go to Section
One month free trial*$5 per employee plus $45 base fee$15 monthly for 20 workers; plus $2 for each additional contractorIncluded in higher tiersHawaii, Vermont, and Washington, D.C., are not covered
Visit QuickBooks Payroll or Go to Section
$8 per employee plus $35 base fee**Included in quote
Visit Rippling or Go to Section
$6 per employee plus $35 base fee$6 per worker monthly
Visit Square Payroll or Go to Section
One month free trial$6 per employee plus $40 monthlyVia third-party software integration
Visit OnPay or Go to Section
Three months free payroll*$5 per employee plus $39 base feePaid add-on
Visit Paychex Flex or Go to Section
Three months free payroll*$2.50 per employee, per weekly pay run plus $49 base fee**Paid add-on
Visit ADP Run or Go to Section
14 days free trial$6 per employee plus $39 base fee***
Visit Homebase Payroll or Go to Section
60 days free trial$4 per employee plus $17 base fee****Starts at $2 per employee plus $6 monthly
Visit Patriot Payroll or Go to Section
Get one month free when you run your first payroll. Offer will be applied to your Gusto invoice(s) while all applicable terms and conditions are met or fulfilled.
**Pricing is based on a quote we received.
***Requires purchase of Homebase’s main time tracking and scheduling platform, which has a free plan for one-location businesses with up to 20 employees.
****Pricing is for the basic plan with do-it-yourself tax filings. Patriot Payroll also offers a full-service option with tax filing services that costs $37 plus $4 per employee monthly.

Gusto: Best Overall Payroll Software for Small Business Users



#1 Gusto


Gusto ranks high among its competitors . As its payroll and HR features enablesmall businesses to operate with the amenities that some larger companies offer. It supports multiple pay schedules and can pay employees via the Gusto Wallet app, direct deposits, and checks you print yourself. Job postings, applicant tracking, and offer letter templates are also available to help streamline hiring processes. Gusto even notifies each new hire so that they can complete the required paperwork. This is unlike QuickBooks Payroll, Patriot Payroll, and Square Payroll, which have basic HR tools.

  • Unlimited pay runs with automated payroll tax payments/filings and year-end reporting
  • Has hiring and performance review tools
    Reasonably priced for small businesses
  • Supports international contractor payments in more than 90 countries
  • Health insurance limited to 37 states
  • Time tracking, next-day direct deposits, and multistate payroll are available only in higher tiers
  • No dedicated payroll specialist


  • Simple: $40 base fee + $6 per employee monthly
  • Plus: $80 base fee + $12 per employee monthly
  • Premium: Custom priced
  • Contractor-only payroll package: $35 base fee + $6 per contractor monthly (for businesses that only pay contract workers)


  • State payroll tax registration: Pricing varies per state
  • HR advisory services for Plus plan only: $8 per employee monthly (this is included for free in the Premium tier)
  • International contractor payments across 90-plus countries: Custom-priced
  • R&D tax credits: 15% of identified tax credits
  • Health insurance and other benefits: Pricing varies by benefit.
Gusto Overview
Key Features / When To Use Something Else
  • Automatic and unlimited payroll runs in all 50 states: Unlike ADP Run and Paychex, Gusto allows you to process unlimited payroll runs, including bonus and off-cycle payments, at no extra cost. On top of that, you can even set payroll to run on autopilot. However, its starter plan only comes with single-state payroll. You’ll have to upgrade to its higher tier if you require multistate pay processing.
  • Automated tax payment and year-end report filing: Gusto withholds, pays, and files taxes on federal, state, and local levels automatically. It handles year-end tax reporting (W-2s and 1099s) for free, unlike ADP Run and Paychex, which charges extra for this.
  • International contractor payments: Businesses can pay their contractors in more than 90 countries, such as India, Canada, the United Kingdom, and the Philippines.
  • Employee benefits: Gusto offers standard and nonstandard benefits options, such as 529 college savings accounts and Gusto Wallet—a free financial management app with time tracking tools. However, its health insurance is available only in 37 (as of this writing).
  • Multiple pay options: With Gusto, employees are paid through manual checks, pay cards, or direct deposits. The standard direct deposit timelines are two and four days, but subscribing to Gusto’s higher tiers gets you a next-day option.
  • Efficient time tracking and workforce management tools: Aside from project tracking and workforce costing tools, you can monitor your employees’ and contractors’ time through Gusto or via the Gusto Wallet. You can also create custom PTO policies and send/approve time-off requests, but these tools are available only in Gusto’s higher tiers.

QuickBooks Payroll: Best for QuickBooks Users and for Fast Direct Deposits


#2 QuickBooks Payroll


QuickBooks Payroll is the best option for most QuickBooks accounting users.


It integrates seamlessly—you access it within the same system with the click of a button—and all information flows throughout both systems (you don’t have to enter twice).

Payroll runs are made easy with automatic pay calculation and tax payment/filing features. Unlike most of the other providers in this guide, its standard direct deposit timeline is a next-day option but can also handle same-day direct deposits if you get one of its higher tiers

  • Has modular HR, payroll, expense management, and IT solutions that integrate seamlessly with each other
  • Offers global payroll and employer of record (EOR) services for hiring and paying international workers
  • Connects with 500-plus business apps
  • Its professional employer organization (PEO) services can be easily switched on and off
  • Pricing isn’t all transparent
    You have to purchase its workforce management platform before you can buy its other modules
  • HR help desk option with phone and email support costs extra
  • Can get pricey as you add more features
    Occasional software glitches
QuickBooks Payroll



  • Payroll Core: $45 base fee + $5 per employee monthly
  • Payroll Premium: $75 base fee + $8 per employee monthly
  • Payroll Elite: $125 base fee + $10 per employee monthly
  • Contractor payments package: $15 monthly for 20 workers; plus $2 for each additional contractor (for businesses that only pay contract workers)


  • Global payroll: $20 per employee or contractor monthly*
  • EOR services: $599 per employee monthly*
  • PEO services: $65 per employee monthly
  • HR help desk: Custom-priced
  • ACA & COBRA administration: Custom-priced
  • Expense management: Custom-priced
  • Headcount planning: Custom-priced
  • Learning management: Custom-priced
  • Applicant tracking: Custom-priced

*Pricing is based on a quote we received

QuicksBooks Payroll Overview
Key Features / When To Use Something Else
  • Automatic and unlimited payroll: You can approve and set payroll to run automatically with QuickBooks. It also lets you process payroll as many times as your business requires. However, its basic tax filing services only cover federal and state taxes. You have to be on its Elite plan if you want automated local tax filings; otherwise, you’ll have to file local tax forms yourself.
  • Low-cost contractor payments: For small businesses that only need to pay contract workers, QuickBooks Payroll has a budget-friendly contractor payments package. For $15 per month, you can process payments for up to 20 workers (plus $2 for each additional contractor), e-file 1099 forms, and pay contractors via next-day direct deposits.
  • Fast direct deposits: Apart from next-day direct deposits, you can pay employees through same-day direct deposit at no extra cost, provided you subscribe to QuickBooks Payroll’s higher tiers. Note that most providers on this list have a standard two-day processing time, although Square Payroll offers instant payments if you have a Square Payments account.
  • Tax penalty protection: QuickBooks will cover the penalty and interest for any payroll tax error for up to $25,000 a year, regardless of who made the mistake. Note that you must purchase its Elite plan to have your errors covered. Experts will also represent you before the IRS and concerned agencies and will assist you in resolving the problem. No other providers on our list will offer to represent you to help fix tax issues or cover mistakes you make under any circumstance.

Rippling: Best All-In-One HR, Payroll & IT Solution


#3 Rippling


What makes Rippling a good payroll option for businesses is its modular solutions that allow you to choose the HR and payroll tools you need.

It even has an expense management module, as well as an IT solution for monitoring business software access and company computer devices. While its workforce management platform is a must-purchase, the cost of adding full-service payroll is still reasonable.

However, it isn’t as cost-effective as most of the payroll software for small business users in this guide, such as Square Payroll and Patriot Payroll.

  • Has modular HR, payroll, expense management, and IT solutions that integrate seamlessly with each other
    Its professional employer organization (PEO) services can be easily switched on and off
  • Connects with 500-plus business apps
  • Offers global payroll and employer of record (EOR) services for hiring and paying international workers
  • Pricing isn’t all transparent
    You have to purchase its workforce management platform before you can buy its other modules
  • HR help desk option with phone and email support costs extra
  • Can get pricey as you add more features
    Occasional software glitches


  • With Rippling, you have to call the provider to request a quote. Monthly fees start at $8 per employee, per module. Note, however, that you have to purchase its core workforce management platform before getting any of its modules.
  • For an HR payroll platform with time tracking, software integrations, and onboarding/offboarding tools, we were quoted a monthly fee of $35 plus $8 per employee. You can choose to add Rippling’s IT tools to manage business apps and computer devices for $8 per employee, per module monthly. Benefits administration services are also available, but pricing varies depending on the insurance broker


  • Global payroll: $20 per employee or contractor monthly*
  • EOR services: $599 per employee monthly*
  • PEO services: $65 per employee monthly
  • HR help desk: Custom-priced
  • ACA & COBRA administration: Custom-priced
  • Expense management: Custom-priced
  • Headcount planning: Custom-priced
  • Learning management: Custom-priced
  • Applicant tracking: Custom-priced
Rippling Overview
Key Features / When To Use Something Else
  • Payroll analytics: Rippling pulls your last payroll numbers automatically when you begin processing a new payroll cycle so you can compare the two easily. It helps you identify any obvious errors quickly to prevent you from having to backtrack to correct them later.
  • Full-service payroll: With Rippling, you can run payroll with just three clicks. It calculates all employee payments, taxes, and deductions automatically. Payroll tax filings are also done by Rippling automatically. If you have employees and contractors based in satellite offices outside of the US, Rippling can help you manage international payroll processes so you can pay your workers accurately and on time.
  • Robust HR solutions and services: Rippling has a wide range of HR solutions, such as applicant tracking, benefits administration, time and attendance, headcount planning, compensation bands, and learning management tools. Its EOR service can even help you hire and pay international workers. However, these modules are paid add-ons to Rippling’s core workforce management platform.
  • IT solutions: If you have new hires, Rippling can help you assign the computer units and identify business apps that employees have access to. For resigning employees, you can easily disable software access and remotely lock their computers on their last day. Rippling even stores your unassigned computer units in its warehouse, and you can check the inventory through its system. None of the providers we reviewed have robust IT solutions.
  • Flexible PEO: Rippling offers PEO services to businesses that need help managing payroll, benefits, and day-to-day HR operations. And, unlike ADP and Paychex, if you decide that you no longer need a PEO, then you can turn Rippling’s PEO services off from your account.

Square Payroll: Best for Restaurants, Retail Shops & Square POS Users


#4 Square Payroll


Square Payroll is the best choice for restaurants and small retailers that are already using Square’s POS system. The seamless integration between the two Square products makes it easy to import online timecards from Square POS into its payroll tool for pay processing.

It also has tip reporting features that allow you to record tip amounts, deduct taxes, and report them on your tax forms.


You can run payroll as often as you need to at no extra cost (unlike some plans under big-name providers like ADP and Paychex), file quarterly and annual taxes, and sign up for pay-as-you-go workers’ compensation insurance

  • Easy to use and navigate
    Flat pricing with an affordable contractor plan
  • Seamless integration with Square POS
  • Fast direct deposits, including an instant payment option
  • Next-day direct deposits and instant payments require a Square Payments account
    Limited advanced HR functions
  • Standard direct deposit has a four-day processing timeline
Square Payroll



  • Pay employees and contractors: $35 base fee + $6 per employee monthly
  • Pay contractors only: $6 per person monthly
Square Payroll Overview
Key Features / When To Use Something Else
  • Multiple employee payment options: Aside from direct deposit, employees and contractors can be paid through manual checks or via Square’s Cash App. Square Payroll also offers next-day and instant payment options through its Instant Payments feature.
  • On-demand pay option: This allows eligible employees to get a portion of their earned salary before the pay period is over. You don’t need to track these transactions manually because Square will deduct the applicable amount (including transfer fees, if any) automatically when you run payroll.
  • Affordable contractor-only plan: Priced at only $6 per contractor monthly, Square Payroll’s contractor package comes with all the features of its “pay employees and contractors” plan, including unlimited pay runs.

OnPay: Best for Delegating Payroll Duties & Niche Payroll Needs


#5 OnPay


If you have a limited budget, OnPay provides a reasonably priced payroll solution that comes with basic HR tools for managing PTO, employee benefits, and onboarding. While it only has a single plan ($40 plus $6 per employee monthly), it’s one of the lowest-priced full-service payroll packages on our list—excluding Patriot with its DIY option. Plus, it can handle the niche payroll and tax filing needs of businesses like farms and agricultural companies. Its six-level system permissions even provide you with enough flexibility to control who has access to and visibility into payroll and HR

  • Files Form 943 (for agricultural companies)
    Multiple payment options, such as direct deposits, manual checks, and debit cards
  • Affordably priced plan
    Robust system permissions
  • Lacks multiple tiers that cater to varying payroll and HR needs
  • Doesn’t have live phone support on weekends
    Limited third-party software integrations
  • Time tracking available through partner systems


Unlike many of the small business payroll software in this guide, OnPay only offers one plan. For $40 plus $6 per employee monthly, you are granted access to all of its HR, payroll, benefits, and onboarding features.

OnPay Overview
Key Features / When to use something else
  • Special payroll services: OnPay can handle the pay processing requirements of various businesses (like restaurants and bars) and organizations, such as churches and nonprofits. For those with special tax requirements like agricultural businesses, OnPay offers automated tax payments and filings of Form 943.
  • Essential HR tools: OnPay’s in-app offer letters, online I-9 and W-4 forms, e-signature tool, and automated workflows are designed to streamline onboarding. It handles state new hire reporting, plus you can create custom checklists to ensure that incoming employees complete all the new hire requirements. If you need HR guides and legal templates, OnPay has an online HR resource library that you can access.
  • Employee benefits: Unlike Gusto’s health insurance, which covers only 37 states (as of this writing), OnPay’s health plans are available in all states in the United States. Your employees are also granted access to dental, vision, disability, and retirement plans. Furthermore, OnPay can generate employee census data reports that you can use when requesting insurance quotes from carriers and benefits providers.
  • Payroll support: Aside from phone, chat, and email support, OnPay can guide you through pay processing if you need help. The provider even assists new clients in setting up their accounts, migrating employee information, and customizing integrations with accounting and time tracking solutions.

Paychex Flex: Best for Startups & Small Companies Needing Dedicated Payroll Support


#6 Paychex Flex


Paychex has solutions suited for different business sizes. Its Paychex Solo package includes payroll, startup/incorporation services, and access to retirement plan options, making it a suitable solution for one-person businesses.

It also offers Paychex Flex as its main payroll platform, which comes with several tiers flexible enough to cater to companies of different sizes.

A dedicated specialist is even on hand to help you with your payroll concerns. Unlike QuickBooks Payroll and Gusto, which have limited health insurance coverage, Paychex Flex lets you offer health insurance in all states in the US

  • Flexible plans
    Payroll and HR features are integrated
  • Dedicated payroll support
    Has a wide suite of HR tools, from recruiting and time tracking to payroll and learning management
  • Pricing isn’t all transparent
    Access to learning management and state unemployment insurance (SUI) services are available only in higher tiers
  • Time tracking, benefits, recruiting, and document management are paid add-ons
  • Year-end tax filings cost extra
Paychex Flex



  • Paychex Flex Essentials: $39 base fee + $5 per employee
  • Paychex Flex Select: Custom priced
  • Paychex Flex Pro: Custom priced

Paychex Plan for Solopreneurs and the Self-employed

  • Paychex Solo: Custom priced
Paychex Flex Overview
Key Features / When To Use Something Else
  • Hands-free pay processing: The “Paychex Voice Assist” feature offers a hands-off experience in processing, reviewing, updating, and submitting payroll. This voice-activated tool, which works on any Google Assistant-compatible device, comes with built-in verification and artificial intelligence (AI) solutions for user authentication. You can start a new pay period, make adjustments, or continue a pay run that’s already in progress—without having to log in to your Paychex Flex account manually.
  • PEO services: If you ever go through a growth period in which you need an HR expert but aren’t ready to hire, Paychex has a PEO service to help you manage essential day-to-day HR processes.
  • Multiple payment options: Aside from direct deposits, Paychex Flex supports employee payments made through pay cards and paper checks. It even offers check logo and signing services. Similar to Square Payroll and QuickBooks Payroll, Paychex Flex also has a same-day payment option but via automated clearing house (ACH) transfers—provided you get its Select plan.
  • HR tools: In addition to a library of HR documents and an online employee handbook builder, you are granted access to a learning management module to help you run e-training courses for your staff and a performance review solution for tracking employee performance. Screening applicants and welcoming new hires will also be easy with its background checks and online onboarding solutions.
  • Experienced customer service: During implementation, Paychex will assign you a representative to help you set up. Once its system is up and running, you get access to US-based support with experienced professionals you can contact 24/7 in case you need assistance. You even have the option to submit payroll via phone to your designated payroll specialist. Live chat features, in-app help options, and how-to guides are also available.

ADP Run: Best for Scaling Businesses That Need Flexible Plans


#7 ADP Run


ADP Run is ADP’s payroll system for small businesses with up to 49 employees. Aside from payroll and tax management tools, it offers new hire reporting, background checks, learning management, and job postings (via ZipRecruiter). Its higher tiers even come with extra HR support and handholding that you don’t get with your typical small business payroll software like Square Payroll. ADP also makes it easy to transition from one plan to the next if your company scales and you need additional HR tools.

  • Multiple plans to choose from
    Automatic quarterly and annual tax filings
  • Advanced HR support available
  • Built-in compliance tools that flag potential errors
  • Pricing isn’t transparent
    Setup fee required
    Year-end reporting costs extra
  • Benefits, time tracking, and workers’ compensation are add-on products



  • Essential: $49 base fee + $2.50 per employee, per weekly pay run*
  • Enhanced: Custom priced
  • Complete: Custom priced
  • HR Pro: Custom priced

*Pricing is based on a quote we received for 25 employees

ADP Run Overview
Key Features / When To Use Something Else
  • Multiple employee payment options: With ADP Run, you can pay your employees via direct deposit and paychecks and through the Wisely Direct Debit Card. It also offers secure paychecks with check signing and stuffing services. ADP will even deliver the sealed envelopes containing employee paychecks to your office so that you can distribute these to your staff.
  • Flexible plan options: In addition to ADP Run’s multiple tiers with full-service payroll and access to essential HR tools, ADP has a wide range of products that can cater to midsize and large businesses. It offers a PEO option, ADP TotalSource, for companies that need to outsource their payroll and HR administration completely.
  • Certified, experienced payroll professionals available 24/7: Similar to Paychex Flex, ADP Run allows you to get in touch with payroll and HR experts whenever you need them. You also receive legal assistance on employment matters from Upnetic Legal Services—provided you subscribe to its highest tier.
  • Recruitment and HR tools: ADP’s partnership with ZipRecruiter makes it possible for you to post open jobs to leading job boards. It also offers background checks, state new hire reporting, and onboarding, in addition to training tools and an online library of HR forms and documents. You won’t get this level of HR support with any other provider on our list except Paychex Flex.

Homebase Payroll: Best for Businesses Employing Hourly Workers


#8 Homebase


Homebase Payroll is an add-on module to Homebase, which has a suite of time tracking, hiring, and scheduling solutions.

Similar to Square Payroll, it offers flat pricing for its easy-to-use pay processing solution that includes automated payroll tax payment and filing services.

Its payroll platform is designed specifically for hourly teams, given its solid solutions for planning staff schedules and capturing employee attendance at work.

It even offers job postings, applicant tracking, PTO management, and new hire onboarding tools.

  • Flat pricing with reasonable monthly fees
  • Payroll plan includes time tracking, scheduling, job postings, and applicant tracking tools
  • Unlimited pay runs with automated payroll tax payments and filings
  • Lacks health insurance options
  • Its payroll tool integrates only with QuickBooks Online
    Can get pricey if you have a multilocation business and more than 20 employees
Homebase Payroll


Payroll Plan*

  • $39 base fee + $6 per employee monthly

*Requires subscription to its time tracking and scheduling software, Homebase, which has a free plan for one-location businesses (with up to 20 employees).

Homebase Payroll Overview
Key Features / When To Use Something Else
  • Robust payroll plan: Homebase Payroll is one of the payroll systems for small businesses that we reviewed that’s reasonably priced and comes with several HR features. For only $39 plus $6 per employee monthly, you get hiring, onboarding, time tracking, and scheduling tools in addition to full-service payroll and automatic tax filing services. Gusto, ADP Run, Paychex Flex, and Rippling may offer similar functionalities but you either have to pay extra or subscribe to its higher tiers to get these solutions.
  • Full-service payroll: Unlike Paychex Flex and ADP Run, Homebase Payroll offers unlimited pay runs so that you can process employee and contractor payments as many times as you need in a month. Salaries are sent to the employees’ accounts via direct deposits, although Homebase Payroll also supports payments made through printable checks. In addition to W-2 and 1099 reporting, Homebase provides automated payroll tax payments and filings.
  • Early access to wages: Homebase Payroll offers an employee perk that grants your staff early access to wages. Your workers can transfer a portion of their salary to their bank account before payday to help pay for emergency expenses.

Patriot Payroll: Best for Mom-and-Pop Businesses That Want a Low-cost DIY Option


#9 Patriot


Patriot Payroll offers a flexible option that others in this guide don’t: a choice between full-service payroll and a more affordable DIY version.

Both come with unlimited payroll runs, multiple pay rates, automated PTO accrual calculations, and customizable deductions and contributions. You can pay employees through direct deposit or manual checks, and if you choose its full-service plan, Patriot will pay and file all federal, state, and local taxes.

It even has add-on solutions for tracking employee attendance and managing employee information

  • Affordable
  • Multiple plans include full-service payroll and a do-it-yourself (DIY) option
    Unlimited pay runs
  • Free payroll setup and expert support
  • Multistate tax filings and time tracking cost extra
  • Lacks benefits options
  • Standard lead time for direct deposits is four days
  • Very limited HR tools
Patriot Payroll



  • Basic Payroll with DIY tax filings: $17 base fee + $4 per employee monthly
  • Full Service Payroll: $37 base fee + $4 per employee monthly


  • Multistate tax filings: $12 monthly for each additional state
  • 1099 e-filings (for Basic Payroll subscribers only): $20 for up to five 1099 e-filings; an additional $2 per 1099 is required for six to 35 filings (no additional charge for 36 or more)
Patriot Payroll Overview
Key Features / When To Use Something Else
  • Self-service plan: You can save the most money if you have a couple of employees and are willing to file payroll taxes on your own using Patriot’s Basic Payroll plan. Priced at only $17 plus $4 per employee monthly, this is the most cost-efficient option among all the payroll providers in this guide.
  • Flexible payroll system: In addition to unlimited pay runs, Patriot Payroll supports multiple pay rates, plus you can either use its standard deduction and contribution types or create your own to capture payroll details for garnishments, health insurance options, and retirement plans. Employees and contractor payments are made through direct deposits, but the processing time is four days.
  • Tax penalty guarantee: If you subscribe to one of its Full Payroll plans, Patriot ensures that your taxes will be calculated and filed on time. Any disputes will be resolved and paid for by Patriot for tax filing mistakes that its representatives commit. Compare this to QuickBooks—under its Elite plan, it covers the penalty and interest for any payroll tax error for up to $25,000 a year, regardless of who made the mistake.

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